Insertion junction: CLIP2.050350_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.050350
Chromosome:chromosome 2
Location:5539065
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g114900 ANK23 Predicted protein with ankyrin repeats; (1 of 7) PF12796//PF13637 - Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_4) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCCTGAACCGGTTCGCCAGCCGCAGCCTGGGCTACGAGGCGGCCGGGG
Internal bar code:TACAATACCATGTAGCAACGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:926
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGCCCTAGTCACGATGTC
Suggested primer 2:GGGGCAGCATCAGACTCTAC