Insertion junction: CLIP2.050363_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.050363
Chromosome:chromosome 8
Location:3935239
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382200 (1 of 4) PTHR11584//PTHR11584:SF377 - SERINE/THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCTTCGCATTGTGGCTCACCGTGACTGCCAGCTTGAGCTGTCTCTCCA
Internal bar code:TAAATGTGTCTATGACTTTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:448
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AATGCGGGGAGGATGAAGTG
Suggested primer 2:TTTGTAAGTTGCCGCTGTGC