Insertion junction: CLIP2.050366_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050366
Chromosome:chromosome 12
Location:5791869
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532850 PHR3 (1 of 4) PF00497 - Bacterial extracellular solute-binding proteins, family 3 (SBP_bac_3); Putative photolyase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACCCGCGTTTCCAACCCATTCACTGCTGCATGCAGGACGCTGTGGTT
Internal bar code:TACTAAATTAGTTTTGTTAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3910
LEAP-Seq percent confirming:80.4878
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CATGAGAATGGCGGCACATG
Suggested primer 2:TCCTACCTCCTCCCCACATG