Insertion junction: CLIP2.050367_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050367
Chromosome:chromosome 3
Location:1506289
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g151550 (1 of 1) IPR000104//IPR029060 - Antifreeze protein, type I // PIN domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCGATTGCCGATCACTGGTGTAAATAAGGACATGCAGGCCAGGGAGT
Internal bar code:GACAGGGTTTCCCTTCGCATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2377
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TTCATCCCCGATGTAAGCCG
Suggested primer 2:GGGATGCTAGCTGGTGACTC