Insertion junction: CLIP2.050369_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050369
Chromosome:chromosome 7
Location:1348682
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g322650 CSA1 Chlorophyceae-specific gene family A protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAACCCGGCCCATGCAACCCACGCCTTCCCCTTGTTCTTTCTGGACAC
Internal bar code:CTTATGTTGTTTCGCAATGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:443
LEAP-Seq percent confirming:20.339
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGGAACCGGTAAATGGG
Suggested primer 2:TGTTACAAGGGACGTCGGTG