Insertion junction: CLIP2.050374_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050374
Chromosome:chromosome 6
Location:6193531
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g292050 MMP21 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGCGCAAAGGCAGCACAGGGCAGCGCCGTAATACGGCCTGCTGCGCC
Internal bar code:AGGTATGTCCCTCAGGGTGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:249
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCACCTCTTCCCACCTTC
Suggested primer 2:CCCGGACTGCTTTTAGTGGT