Insertion junction: CLIP2.050377_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050377
Chromosome:chromosome 16
Location:836607
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g801885 (1 of 1) K15264 - putative methyltransferase [EC:2.1.1.-] (NSUN5, WBSCR20) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGCGTGGCTTGGGCTCGAGGCGGTTACCACGGATGCGTGTCATTGCG
Internal bar code:AGCATAGTAGGGGAGAGACGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1405
LEAP-Seq percent confirming:60.7143
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TCCACCAACACCAACACCAA
Suggested primer 2:GTGTTTGTGTTGGGCAGGTC