Insertion junction: CLIP2.050378_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050378
Chromosome:chromosome 9
Location:4892224
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801061 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTGGTTAGTATCCCCGCCTGTCACTTCTCTGCCCGCGGGAGGCCGGGG
Internal bar code:TAAGGGATTGGATTATCAAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2105
LEAP-Seq percent confirming:21.4286
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGCTATTGTGCCTTCCG
Suggested primer 2:TAGAATCGTGCGGCTGCTAG