Insertion junction: CLIP2.050378_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050378
Chromosome:chromosome 9
Location:4892224
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801061 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGATGACGACCCCTCATCCTCAGCATTGAGCTGAGCTGTCGTGTGTGT
Internal bar code:ATGGAACAGAGAAGCGAGTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4106
LEAP-Seq percent confirming:51.5464
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:TAGAATCGTGCGGCTGCTAG
Suggested primer 2:GCATGCTATTGTGCCTTCCG