Insertion junction: CLIP2.050379_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050379
Chromosome:chromosome 12
Location:4976776
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g524850 (1 of 1) IPR000104//IPR003593//IPR027417 - Antifreeze protein, type I // AAA+ ATPase domain // P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGCTGCGCGGGGCGAGGCGCTGCGGGTGCTGCGCCAGGCGGCGCGCG
Internal bar code:GTAGATTTCAGCTTATAGACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1795
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCCGGGTCGTAGTACATG
Suggested primer 2:GCGACAGGCATAAAAGCGAG