Insertion junction: CLIP2.050381_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050381
Chromosome:chromosome 14
Location:4151615
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g634113 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACGTAGTCGCTCGGATCGTGGCCAGGCAGTAGCACAGTAGTCAGGGTG
Internal bar code:GAGGTGGCTTATTATTAGCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2452
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TCCACTATCTCACCGGCAGA
Suggested primer 2:GGAACCATATGCTGCGCTTG