Insertion junction: CLIP2.050385_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050385
Chromosome:chromosome 9
Location:6532002
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g415850 CAG3 (1 of 1) PTHR13061:SF11 - GAMMA CARBONIC ANHYDRASE 1, MITOCHONDRIAL-RELATED; Gamma carbonic anhydrase 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCAATGAGTGGGCTCAAGCGTCAGGAGGACGTTTTGGCAGGCGACGCC
Internal bar code:CTAGGTTCAGCAGGGTGTTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:344
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GGCACTGCAAAGACCCAAAG
Suggested primer 2:GGGGCTTTCTACGTGACACA