Insertion junction: CLIP2.050396_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050396
Chromosome:chromosome 5
Location:835833
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g246100 (1 of 1) IPR019887 - Transcription regulator AsnC-type, C-terminal intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAGGGGGAGGGAGAAGAGGGGACGGTGTCGCGTGTGGCTCGAAATGGC
Internal bar code:ATGGGTGGGACTTAGATTTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:818
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTTGCCGCCGTTGTAGTA
Suggested primer 2:CATTATCAATGGTGGCGGCG