Insertion junction: CLIP2.050401_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.050401
Chromosome:chromosome 9
Location:6060796
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412700 (1 of 3) PF01541 - GIY-YIG catalytic domain (GIY-YIG) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGGCCCGGTACGCTGTCACAAGGCCCGTCCAGAGCGCACCGCTCCAAA
Internal bar code:CTCGTTAGGTGCTCCGGTATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1113
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TTAAACAGCGCTGCAACCAC
Suggested primer 2:GACCGCCCTGCATAGTCTAC