Insertion junction: CLIP2.050405_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050405
Chromosome:chromosome 10
Location:90731
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g418150 FAP178 (1 of 1) IPR001715//IPR010441 - Calponin homology domain // CH-like domain in sperm protein; Flagellar Associated Protein 178 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACATACGTTAGCATGTGCGGAGGCGGCGGTGGCGCGGCAGTGCACCCAC
Internal bar code:AGACAAAGAGAACGAGCGGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:579
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TACCCTGGTGTCATTTCGGC
Suggested primer 2:ATAGACACCGCACAAGCACA