Insertion junction: CLIP2.050409_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050409
Chromosome:chromosome 7
Location:5482920
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g351100 THB5,PRX (1 of 1) IPR000104//IPR001486//IPR009050 - Antifreeze protein, type I // Truncated hemoglobin // Globin-like; Truncated hemoglobin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGTTTTCGGCATAAACCCTGGAAAACATATGAGCTCCTGACGCAAAC
Internal bar code:CTGGGGTAGGTGGGACGCAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1431
LEAP-Seq percent confirming:4.34783
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:66
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTGCCAGACTGTTGGGTT
Suggested primer 2:CGTGGCCCAGTATCTCAGAC