Insertion junction: CLIP2.050410_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050410
Chromosome:chromosome 14
Location:2457619
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g623850 (1 of 41) IPR000719//IPR011009 - Protein kinase domain // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGATGTCTCGCGGCCGTTTGTATGAAAGTTGTGCATTTGGATAACTTAA
Internal bar code:AGTGCTGCCCGCGATTTGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2434
LEAP-Seq percent confirming:51.8519
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCCTGTAACCCCTGCTG
Suggested primer 2:TTCCAAATCCGAGACAGGGC