Insertion junction: CLIP2.050410_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050410
Chromosome:chromosome 14
Location:2457627
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g623850 (1 of 41) IPR000719//IPR011009 - Protein kinase domain // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACATCGGCAATGCCTCCGAAAAGCAAAAACGGCCGAGAGTGGGGCAATG
Internal bar code:GTCAGTAATGAAATAAGTAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2499
LEAP-Seq percent confirming:92.5
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCAAATCCGAGACAGGGC
Suggested primer 2:CCTTCCTGTAACCCCTGCTG