Insertion junction: CLIP2.050416_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.050416
Chromosome:chromosome 3
Location:5226698
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g181950 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACATGGGCATGCCCTCACCCTGCCTTGCCTAACAGGCCCTGCCCGTTT
Internal bar code:TAGACGGTCGTCCTCCTACCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1301
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGTTGCATGTCTCATGGT
Suggested primer 2:CCTCCAAACCCACACCAACT