Insertion junction: CLIP2.050418_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050418
Chromosome:chromosome 10
Location:5027496
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g454700 (1 of 1) IPR001611//IPR003591//IPR025875 - Leucine-rich repeat // Leucine-rich repeat, typical subtype // Leucine rich repeat 4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGTGCTGGGCCAGATGCGGGCCAACCTCAAACTGCCCGTGTATGAGG
Internal bar code:CTCTGACGATCAATCGTTCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:352
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGGTGAAGAGGATGTGGG
Suggested primer 2:GTGCAATTGAGTAGCTCGCG