Insertion junction: CLIP2.050425_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050425
Chromosome:chromosome 17
Location:3282441
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g722050 (1 of 1) K19202 - histone deacetylase complex subunit SAP30 (SAP30) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGCACTGCGCTGAGGCTGAGGCGCGCTTGCGTCAACACAGCGGCCTTC
Internal bar code:GCAGGTTCGCTTGGTTAGCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2933
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCCCAACCCTTCTCAAT
Suggested primer 2:CTTGCTGACACCGGTTGTTG