Insertion junction: CLIP2.050429_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050429
Chromosome:chromosome 11
Location:649346
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467613 (1 of 1) IPR000742//IPR001881 - EGF-like domain // EGF-like calcium-binding domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGGAGAACCTGCCGCCTTTCCATGCCTACATCCAACTCACCCGAGAAA
Internal bar code:CGTTCGAGGCTGTAATGCTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1621
LEAP-Seq percent confirming:11.7647
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:60
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCCTGGAATGGTGGCTTG
Suggested primer 2:AGTCGAGGGTGCAATTGGAG