Insertion junction: CLIP2.050433_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.050433
Chromosome:chromosome 3
Location:8739240
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g208273 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGTTCCAGGGAGGGCGGCGTGGAGCAACGGCACGCCAGATGCCGGCTG
Internal bar code:CGCTAAATGCACTGATCTATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:249
LEAP-Seq percent confirming:5.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGCAGCCTTGTGGGAGAT
Suggested primer 2:GGTCCAGAAAGAGAGGTGGC