Insertion junction: CLIP2.050441_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.050441
Chromosome:chromosome 9
Location:656241
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g404800 (1 of 20) IPR008972 - Cupredoxin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCACCTGCATCGAGTACCCTGATTCCCCGACGCAACCTATCCTCCCCC
Internal bar code:CGCTTTTTATCTTGACCTTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2611
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCACATTGTCGCCAAACA
Suggested primer 2:GTCAGTGCTCAGGTGATGCT