Insertion junction: CLIP2.050444_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050444
Chromosome:chromosome 6
Location:2013909
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g265300 CSS2 Chlamydomonas specific family S protein; (1 of 7) IPR011048 - Cytochrome cd1-nitrite reductase-like, haem d1 domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCATACACCCATCCCTGCCTGTCCGCACTAATGGTCTTGTGGTGTTCC
Internal bar code:GTGCTGGTCAGCGGTTTGTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5252
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:117

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGAGATGGACAGGGTCAT
Suggested primer 2:TTACACTGGCGCTTGTTTGC