Insertion junction: CLIP2.050446_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.050446
Chromosome:chromosome 3
Location:244944
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144324 (1 of 8) PF00560 - Leucine Rich Repeat (LRR_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTCTGCATCCTTACCTGCACTGAACATGCACGGCTCTACGTTGGCCG
Internal bar code:GTGGATCAGCAGACCGTGTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:973
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CGTACTGCCCCTTCTTGTGT
Suggested primer 2:CGCAGGTTCTCCTTGGATGT