Insertion junction: CLIP2.050448_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050448
Chromosome:chromosome 16
Location:2200691
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g658150 (1 of 13) PTHR13244//PTHR32523//PTHR32523:SF8 - ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAACCCCGCCAGCGCCACCAGAGGCGGCAGCCACTGCTGCAGGGCGAA
Internal bar code:ACTTAACGCTCCTTACTCGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:288
LEAP-Seq percent confirming:4.7619
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGACACCGTTGACCGATG
Suggested primer 2:TGGCATGGCATTGGTGATCT