Insertion junction: CLIP2.050452_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050452
Chromosome:chromosome 3
Location:4083455
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172200 (1 of 12) IPR001680//IPR015943//IPR017986 - WD40 repeat // WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCGTCTGGAGAAGGCGGACGTAGTGTTGGGGTCACCTTTGAAGCGTG
Internal bar code:TTTTTTAACGGAGATGACGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1052
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGACCACTCTGCGAACT
Suggested primer 2:GACCTGGTGTCTGTGTACGG