Insertion junction: CLIP2.050458_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.050458
Chromosome:chromosome 12
Location:3302446
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498950 (1 of 42) IPR000008 - C2 domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCGCCCTCGCCGCCCGCGTTGGGCTTGAACAGCTCAAAGTACTTGTCG
Internal bar code:TGTTCGATTTCTTTTATAATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1137
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGAGCATGAAATGGGGCA
Suggested primer 2:TCCGCTTCTGTCCTTGTGTC