Insertion junction: CLIP2.050466_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050466
Chromosome:chromosome 16
Location:387050
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g693800 (1 of 1) PTHR22883//PTHR22883:SF35 - ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN // PALMITOYLTRANSFERASE ZDHHC6 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACGCCTACTCGCACCTGCGCTACTGCTGGTCGTGCCGCGGCCCGCAGC
Internal bar code:CACAGCGGATTGTCCGTACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:192
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGGGGAAGGGATCGACAC
Suggested primer 2:TGGACACCCTTGCAAGTGTT