Insertion junction: CLIP2.050474_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.050474
Chromosome:chromosome 3
Location:566898
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145287 (1 of 1) PTHR24188//PTHR24188:SF39 - ANKYRIN REPEAT PROTEIN // ANKYRIN REPEAT AND SOCS BOX PROTEIN 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCTGGGCAGGGTGTGTTGGGGCCATGTACGATGGGGGATGCACCTTG
Internal bar code:ACTAACGGCGCGCGCACAACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3245
LEAP-Seq percent confirming:97.7273
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTACCATGAAGACGCGCA
Suggested primer 2:ATCCATTGCCACCGACCATT