Insertion junction: CLIP2.050474_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050474
Chromosome:plastome
Location:193798
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802334 orf528 unknown ORF CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACGTTTTCTTTGCGACGCCAGGGGCAGTTGTACCGCCACTGCCTGCAG
Internal bar code:GCGCTCTGGTGGTGTATAACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:116
LEAP-Seq percent confirming:4.16667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGCTTCTTCCATCAAGTTG
Suggested primer 2:GGGGCAAAGCATGGGAGTAT