Insertion junction: CLIP2.050481_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050481
Chromosome:chromosome 13
Location:3761937
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588736 (1 of 10) IPR000104//IPR001810 - Antifreeze protein, type I // F-box domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCCCGTTATAATTACTGTACTTGCGTAGTGCTCACAGACCATGGAAGA
Internal bar code:CTTGTCTGGATGCCCTCTAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:4867
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGATCTGTTGCTGCTGCT
Suggested primer 2:TCCTCCCTGCCTGCTTATCT