Insertion junction: CLIP2.050484_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050484
Chromosome:chromosome 6
Location:5691740
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g288000 (1 of 21) IPR004827 - Basic-leucine zipper domain intron
Cre06.g800700 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTCACCACCTCAATGGAACCCCCTGTTGCGGAATGAGTTCGTTCCAAC
Internal bar code:GACACACGCACAGGTGCACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3193
LEAP-Seq percent confirming:49.0909
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGGCACGCTATCATTAGT
Suggested primer 2:GCGCGAAGTTCGTTACTGAC