Insertion junction: CLIP2.050489_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050489
Chromosome:chromosome 3
Location:8806315
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206817 (1 of 2) IPR001739//IPR016177 - Methyl-CpG DNA binding // DNA-binding domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGTGCATGCGCTGGAGTCGGTCACGGAGCTGCTTGTGCTTGGGATGGA
Internal bar code:ACAGCCATTCTGGATAAGCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1222
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATCATGTGACTCTGGGT
Suggested primer 2:TCTGTCCTTTGGTGACCACG