Insertion junction: CLIP2.050496_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050496
Chromosome:chromosome 9
Location:2563831
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392653 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGGCTTGTGAGCAGGTAGGCCCGCAACTCACGGGGTAGCTGTCGGCGA
Internal bar code:TGATCGCTAGTTCGACTCTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3460
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGCTCCTCATCATGATCA
Suggested primer 2:ACGTACGGCCGTTGTGTTAT