Insertion junction: CLIP2.050497_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050497
Chromosome:chromosome 2
Location:1604417
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g085050 COP1,PCOP1 Plant-type constitutive photomorphogenesis protein 1; (1 of 2) K10143 - E3 ubiquitin-protein ligase RFWD2 (RFWD2, COP1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATCAGCCTGAGCTCACGCAGCAGCCGCTGTCCATCTCGCCCTTCGGCG
Internal bar code:ATATGATACGAGGTGTTTAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1151
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCGATCGTGACACACAGA
Suggested primer 2:GAGCGCTGCTACCTTCAGAT