Insertion junction: CLIP2.050501_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050501
Chromosome:chromosome 2
Location:7948970
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g145350 (1 of 30) PF03407 - Nucleotide-diphospho-sugar transferase (Nucleotid_trans) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCTGTACCTGCGGTACCCCATTAACGTCACGTTTGCGCCGGGCACCGA
Internal bar code:ACCCTACCGGCCCACACGATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3639
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGTAGTCTCCTGATGCC
Suggested primer 2:CAGAGACAGCAGCTGAACCA