Insertion junction: CLIP2.050502_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050502
Chromosome:chromosome 2
Location:3447846
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g098750 (1 of 7) PF00027//PF00520 - Cyclic nucleotide-binding domain (cNMP_binding) // Ion transport protein (Ion_trans) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCGTCTGCGGTTGGTGCAGCACCTTCGGTGCCACCCAGCCCACGTCC
Internal bar code:AATTGAGCCAAGGCGTTTTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1784
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TCCATTTGACGAGAGCGAGG
Suggested primer 2:GATGCTGCTGGTGCTTATGC