Insertion junction: CLIP2.050509_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050509
Chromosome:chromosome 6
Location:3144869
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275650 RPN3 (1 of 1) K03033 - 26S proteasome regulatory subunit N3 (PSMD3, RPN3); 26S proteasome regulatory subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACAGCGAGTTGTTGGTTGGCAAGTGCGTGCATAATGGCAACCTGTAA
Internal bar code:ATGATGTGGTACCGCCACGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:961
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CACCAAACCCAACGAGCTTG
Suggested primer 2:CGCACTTCGGGTATAGTCCC