Insertion junction: CLIP2.050511_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050511
Chromosome:chromosome 17
Location:2967451
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802061 (1 of 11) IPR000626//IPR029071 - Ubiquitin domain // Ubiquitin-related domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAAACACAAAGGTTCTGGCACGGCAAGGAGCTGACGCCCGGCTACGACG
Internal bar code:GCGCGCTTGAGATGTTCGGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1457
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTACGCAAACCTGCCCCTTA
Suggested primer 2:GACTGCTCTCGTGTCTCACC