Insertion junction: CLIP2.050516_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.050516
Chromosome:chromosome 10
Location:1506594
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428678 GID1,MNMG1,MNMG (1 of 1) K03495 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme (gidA, mnmG, MTO1); tRNA uridine 5-carboxymethylaminomethyl modification enzyme intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAGCCGCCAGGAAGGGCGTTGCGGTAAGGCACAGCGAGTTAGGGACAG
Internal bar code:GTTTTGGTTAGAAGAATCGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1615
LEAP-Seq percent confirming:95.1219
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CACACAGCCTCACAAACACG
Suggested primer 2:TCCGTGCTGCTTATGGTTGT