Insertion junction: CLIP2.050517_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.050517
Chromosome:chromosome 2
Location:6470823
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388650 CYG29 (1 of 11) 4.6.1.1//4.6.1.2 - Adenylate cyclase / ATP pyrophosphate-lyase // Guanylate cyclase / Guanylyl cyclase; Adenylate/guanylate cyclase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAACCGCGGTGTACTGACTTGAGCGCAGGGGCGCCGAGTACGTGCTGC
Internal bar code:TCCGGTAAGTTAGCTTGTGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1380
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCGATGGATTCTTGTTCGCC
Suggested primer 2:TAGCCTTGCACCTGTCACTG