Insertion junction: CLIP2.050526_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050526
Chromosome:chromosome 12
Location:1525906
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00079298

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACCTAACTCAGCGCATCGGACTCGCTGGAGAGACGAATCTCCTCGCAG
Internal bar code:GGAGTCGGGATCTTCATTACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1567
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCACACACAGCAGCAAC
Suggested primer 2:CATCATCGGTACAGAGGCCC