Insertion junction: CLIP2.050535_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050535
Chromosome:chromosome 16
Location:3170130
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g665364 GAK,GDAK1 (1 of 1) K17530 - doublecortin-like kinase 3 [EC:2.7.11.1] (DCLK3); Gliding Associated Kinase 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGGGGTTGATTGGCTTGCGGGGTCGTTGGACGTTTGTGCATGGTACCT
Internal bar code:ACAATGGGCACTGAGTGGCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2852
LEAP-Seq percent confirming:59.2593
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGCCAGTAGACGTCCAAA
Suggested primer 2:TTAACCAGTAGGCCCAAGCG