Insertion junction: CLIP2.050536_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.050536
Chromosome:chromosome 3
Location:4952249
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g179250 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTGATGGTAGGTGCACTCGATTTCTGTGTGCGTACTTCATGCCCCTCA
Internal bar code:CACATGTTTAACTCGTATGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1412
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GACCCCAGCCCAAACTCTAG
Suggested primer 2:AGGTTTGTCGTTTCGCGTTG