Insertion junction: CLIP2.050541_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050541
Chromosome:chromosome 6
Location:8389138
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g307900 FAP141 (1 of 1) PF15104 - Domain of unknown function (DUF4558) (DUF4558); Flagellar Associated Protein 141 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGTGAAAACTAAAAGCGTGATAGCGTGATGGATAGAGTACGTACAGTG
Internal bar code:AAAGGCTTGCTGAGAGCCCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2114
LEAP-Seq percent confirming:56.9231
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCCCAGAAATGTACGCG
Suggested primer 2:GGACAACTTTGCACGCCATT