Insertion junction: CLIP2.050545_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.050545
Chromosome:chromosome 10
Location:838259
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre10.g423400 (1 of 2) 1.3.1.89 - tRNA-dihydrouridine(47) synthase (NAD(P)(+)) / tRNA-dihydrouridine synthase 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGTTGAGCGGCGTTCCACGACACGCGTGCCCAGCTCTCTGCTCCGTTC
Internal bar code:CACGTACGACGCCTCTAGGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:813
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGTTGTGGGTTGTTGTCG
Suggested primer 2:TCTAGCAGGTAGGCTGTCGT