Insertion junction: CLIP2.050546_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.050546
Chromosome:chromosome 6
Location:3318198
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g277550 (1 of 3) 3.5.5.1 - Nitrilase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAACCAAGGCAAACTAGCGGAGCGCAGGCAGAGGCGCTAGCTGCAAGCG
Internal bar code:GCATGGCGTGGGTGGGACCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:346
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGAGGGAGGAGGGACAGT
Suggested primer 2:GCTGCGATGGAGTCTACCTC