Insertion junction: CLIP2.050549_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.050549
Chromosome:chromosome 3
Location:4148537
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172900 (1 of 2) PF11371 - Protein of unknown function (DUF3172) (DUF3172) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAAACCCTGGCTGGGCTGTGCCGCCCACCGGTCCCGTAACCCAAGCAT
Internal bar code:ATTTTTCATCTACGGCCTCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1015
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCAAAGGTTGCTGTCAAG
Suggested primer 2:CTTTTGAACGGAGGAGCCCT